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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72765690 chr15:89388278 G/A RBX1 chr22:41347351-41369313:+ -0.35 -6.33 5.64E-10 Box Plot
THCA rs72765690 chr15:89388278 G/A TXN2 chr22:36863083-36878077:- -0.4 -6.03 3.33E-9 Box Plot
THCA rs72767250 chr15:89392282 G/A ALG12 chr22:50293877-50312106:- -0.42 -6.63 9.13E-11 Box Plot
THCA rs72767250 chr15:89392282 G/A DRG1 chr22:31795509-31926620:+ -0.43 -5.95 5.14E-9 Box Plot
THCA rs72767250 chr15:89392282 G/A NHP2L1 chr22:42069934-42086508:- -0.49 -6.82 2.81E-11 Box Plot
THCA rs72767250 chr15:89392282 G/A PICK1 chr22:38452318-38471708:+ -0.44 -6.19 1.3E-9 Box Plot
THCA rs72767250 chr15:89392282 G/A RBX1 chr22:41347351-41369313:+ -0.34 -6.34 5.45E-10 Box Plot
THCA rs72767250 chr15:89392282 G/A TXN2 chr22:36863083-36878077:- -0.39 -6.04 3.16E-9 Box Plot
THCA rs72768421 chr5:49542732 T/C LOC647121 chr1:121260910-121313686:+ -0.35 -7.55 2.16E-13 Box Plot
THCA rs72784580 chr10:45800760 A/T AGAP8 chr10:51224681-51371321:- 0.46 6.09 2.3E-9 Box Plot
THCA rs72784585 chr10:45807259 G/T AGAP8 chr10:51224681-51371321:- 0.46 6.13 1.89E-9 Box Plot
THCA rs72784590 chr10:45811373 A/G AGAP8 chr10:51224681-51371321:- 0.46 6.13 1.89E-9 Box Plot
THCA rs72784593 chr10:45815734 G/A AGAP8 chr10:51224681-51371321:- 0.46 6.13 1.89E-9 Box Plot
THCA rs72785856 chr5:120173829 A/T PBX3 chr9:128509624-128729656:+ 0.26 6.15 1.68E-9 Box Plot
THCA rs72786507 chr10:45834053 T/G AGAP8 chr10:51224681-51371321:- 0.45 6.07 2.62E-9 Box Plot